Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015913501.1_cds_XP_016463544.1_56658
CDS Infomation

[gene=LOC107786565] [db_xref=GeneID:107786565] [protein=glucan endo-1,3-beta-glucosidase 12-like] [protein_id=XP_016463544.1] [location=complement(join(2058..2092,3220..4536,4627..4690))] [gbkey=CDS]
Sequence

ATGGAAAAACTCACCATTTGTCTTCTCCTCTTACACTTTTCCCTTTTCCTTTTCTCCATT
GCAGATGGTGGTTCAATTGGAGTGAACTATGGGCGTGTAGCTAACAACTTACCATCAGCA
GTAAAAGCTGTAGCACTGCTGAAATTTCAAGGCGTAGAACGTGTTAAAGTCTACGATACT
GACCCCGCTGTACTCAAAGCACTTTCCGGGTCGGGTATTATGGTTACCGTTAACCTTCCC
AACGAGCTCCTCTGCAATGCAGCTAAACGCCAGTCATTTGCTTACTCTTGGGTCCAGCGT
AATGTTGTTGCTTACTACCCTTCTACTCAAATCGAATCCATTGCCGTTGGAAATGAAGTT
TTCGTTGACCCGCATAACACGACCCGTTTTCTTGTACCCGCTATGAAGAATATTCATGAG
GCTCTTTTGAAGTACAATATCCATGACAAAATCAAAGTCTCTTCTCCTGTTGCTCTTAGT
GCATTGCAGAACTCTTACCCGTCTTCAGCCGGATCGTTCCGATCCGAATTGGTCGAACCC
GTAATTAAACCCATGTTGGATTTTCTCCGCCAAACTGGATCCTTCCTTATGGTTAACTGT
TACCCGTTTTTTGCATACGAGTCAAACTCCGACGTCATTTCACTTGACTACGCTTTGTTC
CGGGAAAATCCCGGTGTTGTTGACGCCGGTAACGGACTTCGTTACTTTAGCCTCTTTGAC
GCTCAAGTTGACGCCGTTTTCGCTGCATTATCTGCTTTGAAGTACGATGATATCAAAATG
GTCGTAACGGAAACTGGCTGGCCGTCTAAAGGAGACGACATTGAAGTCGGTGCCAGCCTG
GACAATGCCGCCGCGTACAACGGCAACCTAGTCCGGCGAATCCTCACCGGTGGTGGGACC
CCTTTAAGGCCGAAAGAAGACATCACAGTCTTCCTCTTTGCACTTTTCAACGAAAACAAA
AAGCCGGGTCCCACATCGGAGCGAAATTTCGGGTTATTCTACCCGAATGAGCGAAAAGTT
TATGACATACCGTTAAATATGGAGGGACTGAAACATTATATTGACCGGCAGTCACCGGTT
GCCGGCGGCGAGAGAATGCAGAAAGGCGGGAAGGGGAATGTGTCGGCGGGTGTGCCGGGG
CAAACATGGTGTGTGGCGAGTGGTGAAGCGGGGAAGGATAATCTACAAGCAGCTCTAGAT
TTCGCTTGTGGTGAGGGTGGAGCTGATTGCCGTTCGATTCAGCCAGGGTCCACGTGTTAC
AATCCTAACACGCTGGAAGCTCATGCATCATACGCTTTCAACAGCTATTATCAGAAGAAA
GGGCGTGCGATGGGTTCGTGTTATTTTGGTGGGGCCGCTTACATTGTTCATCAACAACCT
AAATATGGAAACTGTGAATTACCCACTGAAGATTGA

Peptide Sequence

PEP ID

XP_016463544.1
PEP Infomation

PREDICTED: glucan endo-1,3-beta-glucosidase 12-like [Nicotiana tabacum]
Sequence

MEKLTICLLLLHFSLFLFSIADGGSIGVNYGRVANNLPSAVKAVALLKFQGVERVKVYDT
DPAVLKALSGSGIMVTVNLPNELLCNAAKRQSFAYSWVQRNVVAYYPSTQIESIAVGNEV
FVDPHNTTRFLVPAMKNIHEALLKYNIHDKIKVSSPVALSALQNSYPSSAGSFRSELVEP
VIKPMLDFLRQTGSFLMVNCYPFFAYESNSDVISLDYALFRENPGVVDAGNGLRYFSLFD
AQVDAVFAALSALKYDDIKMVVTETGWPSKGDDIEVGASLDNAAAYNGNLVRRILTGGGT
PLRPKEDITVFLFALFNENKKPGPTSERNFGLFYPNERKVYDIPLNMEGLKHYIDRQSPV
AGGERMQKGGKGNVSAGVPGQTWCVASGEAGKDNLQAALDFACGEGGADCRSIQPGSTCY
NPNTLEAHASYAFNSYYQKKGRAMGSCYFGGAAYIVHQQPKYGNCELPTED

Transcript Sequence

Gene sequence data has not been registered.